Class
FaiIndex
Data type for storing FAI indices.
Include Headers
seqan/seq_io.h
Functions
| Create FaiIndex from FASTA file. | |
| Reset a FaiIndex object to the state after default construction. | |
| Return id (numeric index in the file) of a sequence in a FAI file. | |
| Return number of sequences known to an FaiIndex. | |
| Read a FAI index. | |
| Load the infix of a sequence from a FaiIndex. | |
| Load a whole sequence from an FaiIndex. | |
| Return length of the sequence with the given id in the FaiIndex. | |
| Return the name of the sequence with the given id in the FaiIndex. | |
| Write out an FaiIndex object. |
Examples
The following example demonstrate the usage of the FAIIndex class.
File "fai_index_example.cpp"
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