Class
LocalMatch
Stores information about local matches.
Include Headers
seqan/parse_lm.h
Parameters
Type to use for subject/query id. | |
Type to use for storing positions. |
Remarks
Matches on the reverse-complement are encoded by the begin position being greater than the end position.
Sequence names are not stored in LocalMatch objects but in the LocalMatchStore they belong to.
Data Members
| Begin position of local match in the query. | |
| End position of local match in the query. | |
| The id of the query. | |
| Begin position of local match in the subject. | |
| End position of local match in the subject. | |
| The id of the subject. |
See Also
SeqAn - Sequence Analysis Library - www.seqan.de