Analysis and Modeling for Geostatistical Count Data

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Documentation for package ‘geoCount’ version 1.150120

• DESCRIPTION file.
• User guides, package vignettes and other documentation.

Help Pages

baseline.dist	Generate Distance Samples to Build Baseline Distribution
BMCT	Perform Bayesian Model Checking
cdfU	Approximate the CDF Value from Reference Samples
cutChain	Modify Markov Chains with Burn-in and Thining
d.base	Data Set of Baseline Samples
e2dist	Calculate Distances between Transformed Residuals and Standard Normal
Earthquakes	Data Set of Earthquakes
findMode	Estimate Mode of the Posterior Samples
helloWorld	Hello
loc2U	Calculate the Distance Matrix among Given Locations
loc2U_R	Calculate the Distance Matrix among Given Locations
locCircle	Simulate Circlular Locations
locGrid	Simulate Locations on Grid
locSquad	Simulate Squared Locations
locUloc	Calculate the Distance Matrix Between Observed and Predicting Locations
locUloc_R	Calculate the Distance Matrix Between Observed and Predicting Locations
MCMCinput	Settings for the MCMC Algorithm
mixChain	Mix Parallel Markov Chains
plotACF	Auto-correlation Plot for Latent Variables
plotData	Plot Geostatistical Data
plotTexas	Plot Texas Counties
plot_baseline	Plot Baseline Samples
plot_etran	Plot Transformed Residuals
plot_pRPS	Plot Observed vs. Reference Diagnostic Statistics
pOne	Calculate One-side P-value
predY	Predict for Unsampled Locations
pRPS	Calculate P-value and RPS
repYeb	Generate Replicated Data with Estimated Parameters
repYpost	Generate Replicated Data with Posterior Samples of Latent Variables
Rhizoc	Rhizoc Data
rhoMatern	Matern Correlation Function
rhoPowerExp	Powered Exponential Correlation Function
rhoSph	Spherical Correlation Function
Rongelap	Data Set of Rongelap Island
runMCMC	Perform Robust MCMC Algorithms for GLSM
runMCMC.sf	Perform Robust MCMC Algorithms for GLSM in Parallel
runMCMCpartialPois_	Internal Function for Robust MCMC Algorithms with Partial Posterior Sampling
runMCMC_	Internal Function for Robust MCMC Algorithms
simData	Simulate Data Set from Generalized Linear Spatial Model on Given Locations
TexasCounty.boundary	Data Set of Texas County Boundries
TexasCounty.center	Data Set of Texas County Centers
TexasCounty.population	Data Set of Texas County Population
tranR	Calculate Transformed Residuals for Observed Data
U2Z	Convert Distance Matrix to Correlation Matrix
unifLoc	Scale Locations into A Unit Square
Weed	Weed Data