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RNAlib-2.4.17
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Functions to process, convert, and generally handle different nucleotide and/or base pair alphabets. More...
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Functions | |
| char * | vrna_ptypes (const short *S, vrna_md_t *md) |
| Get an array of the numerical encoding for each possible base pair (i,j) More... | |
| short * | vrna_seq_encode (const char *sequence, vrna_md_t *md) |
| Get a numerical representation of the nucleotide sequence. More... | |
| short * | vrna_seq_encode_simple (const char *sequence, vrna_md_t *md) |
| Get a numerical representation of the nucleotide sequence (simple version) | |
| int | vrna_nucleotide_encode (char c, vrna_md_t *md) |
| Encode a nucleotide character to numerical value. More... | |
| char | vrna_nucleotide_decode (int enc, vrna_md_t *md) |
| Decode a numerical representation of a nucleotide back into nucleotide alphabet. More... | |
Functions to process, convert, and generally handle different nucleotide and/or base pair alphabets.
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